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Category: Data Analysis Tools

A listing of data analysis tools

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Data Analysis Tools Macinchem Blog

AI for Science Datasets: Request for Proposals

11 December 202511 December 2025 chris

Renaissance Philanthropy is releasing this call for AI for Science dataset proposals in collaboration with the UK’s Department for Science, Innovation and Technology (DSIT). This

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Data Analysis Tools Hints and Tutorials Macinchem Blog Vortex Scripts

Vortex script for Hit expansion

9 December 20259 December 2025 chris

One of the frequent situations after running a screen is you have a list of hits and you want to select related analogues to explore

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Data Analysis Tools Hints and Tutorials Macinchem Blog Science Apps

TabPFN-2.5

10 November 202510 November 2025 chris

I’ve reviewed TabPFN in the past. https://macinchem.org/2025/02/06/looking-at-tabpfn and I noticed there was a recent update. TabPFN is a foundation model  trained on around 130,000,000 synthetically generated

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Data Analysis Tools Macinchem Blog

Isambard-AI and Dawn AIRR supercomputers: Innovator route

6 November 20256 November 2025 chris

Isambard-AI and Dawn AIRR supercomputers: Innovator route Apply for up to 150,000 graphics processing unit hours on the Isambard-AI and Dawn supercomputers for artificial intelligence

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Data Analysis Tools Macinchem Blog Science Apps

Another update

5 November 2025 chris

Stardrop 8 now includes realtime collaboration StarDrop 8 integrates real-time collaboration into every stage of the compound design and optimisation workflow, enabling teams to make better decisions

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Data Analysis Tools Macinchem Blog Science Apps

A few updates

5 November 20255 November 2025 chris

Alvascience recently released a new major version of our tool, alvaModel, our software tool to build, compare, and deploy QSAR/QSPR Models (https://www.alvascience.com/alvamodel/).  New Modeling CapabilitiesRegression

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Data Analysis Tools Hints and Tutorials Macinchem Blog

ChEMBL 36 is out

26 September 202526 September 2025 chris

One of the most useful databases for anyone involved in studies involved in biologically active molecules. ChEMBL is a manually curated database of bioactive molecules

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Data Analysis Tools Hints and Tutorials Macinchem Blog Vortex Scripts

Selecting random clusters from a large dataset in Vortex

18 July 2025 chris

When making selections from large datasets it is worth mentioning that as datasets get larger a simple random selection is often the best (and quickest)

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Data Analysis Tools Macinchem Blog Science Apps

Datagrok platform

24 May 202524 May 2025 chris

I recently came across the Datagrok platform, whilst it is a data agnostic platform they have a very nice YouTube video covering Cheminformatics. There are

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Data Analysis Tools Hints and Tutorials Macinchem Blog Vortex Scripts

Vortex script to change display of workspace

18 May 20255 June 2025 chris

Sometimes when you import a dataset into a Vortex workspace the default display can be not ideal. For example I imported this CDK7 dataset from

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    @macinchem.bsky.social 2 days

    Vibe-coding: Structure Lens

    Nathan Brown posted an interesting snippet on LinkedIn I vibe-coded a chemistry app last weekend. It started as a curiosity, but it’s turned out to be a useful little...
  • View post by on Bluesky

    @macinchem.bsky.social 3 days

    VIBE-QC: an open-source, general-purpose electronic-structure code

    Another example of vibe-coded chemistry software. We present VIBE-QC, a general-purpose open-source electronic-structure code...

    https://macinchem.org/2026/11/10/vibe-qc-an-open-source-general-purpose-electronic-structure-code/
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    @macinchem.bsky.social 4 days

    ChemDoodle 3D updated

    iChemLabs have just announced a version 8 of ChemDoodle 3D software. This update is free for all ChemDoodle subscriptions, Lifetime and Site licenses. Licenses are as little as $29,...

    https://macinchem.org/2026/11/09/chemdoodle-3d-updated/
  • View post by on Bluesky

    @macinchem.bsky.social 4 days

    More on web browser extensions

    I recently published two Compound Lookup extensions for Safari and Chrome both of which have been downloaded over 100 times. They allow you so select a drug name in...
  • View post by on Bluesky

    @macinchem.bsky.social 2 weeks

    Cambridge Cheminformatics Network meeting

    The next Cambridge Cheminformatics Network Meeting is 11 November 2026, 4pm UK time at Cambridge Crystallographic Data Centre, Cambridge, UK and Online (Hybrid...
Last updated 10 minutes ago

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  • Vibe-coding: Structure Lens
  • VIBE-QC: an open-source, general-purpose electronic-structure code
  • ChemDoodle 3D updated
  • More on web browser extensions
  • Cambridge Cheminformatics Network meeting
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Also now on Bluesky @macinchem.bsky.social

@macinchem.bsky.social

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